如何将marcmoose-lint命令与多段Perl脚本整合到单个Bash脚本？

Got it, let's turn all those steps into a single, reliable Bash script that does exactly what you need. Here's a working implementation, plus some context on why your Perl wrapper might have hit snags:

Save this as marc_processing.sh:

#!/bin/bash

# Optional: Stop script if any command fails (uncomment to enable)
# set -e

# 1. Run MARC linting
echo "Running MARC lint check..."
marcmoose-lint unimarc.rules marc.iso

# 2. Process and analyze the lint log
echo "Processing lint log..."
perl -ne 'if (/^([0-9]{3})[()0-9]*: *(.*)$/) { print "$1: $2\n";}' marc.iso.log | sort | uniq -c > formatted_lint_stats.txt

# 3. Execute your Perl scripts
# Adjust these lines to match your actual input/output needs
echo "Running Perl script pipeline..."
perl script1.pl > out1.txt
perl script2.pl filename.txt > out2.txt
perl script3.pl > out3.txt

# If you need the chained input/output flow from your original Perl wrapper:
# perl script1.pl in.fa > out1.txt
# perl script2.pl out1.txt > out2.txt
# perl script3.pl out2.txt > out3.txt

echo "All tasks completed!"

Key Notes & Troubleshooting #

• Make the script executable: Run chmod +x marc_processing.sh first, then launch it with ./marc_processing.sh.
• Why your Perl wrapper might have failed: Common issues include missing relative paths (e.g., if your scripts are in a subfolder, use ./scripts/script1.pl), incorrect file permissions, or typos in filenames. Bash makes these easier to debug because it will print clear error messages if a command fails.
• Error handling: Uncomment the set -e line if you want the script to stop immediately if any step fails (like if marcmoose-lint can't find the rules file).
• Logging: If you want to capture error output, add 2>> workflow_errors.log to any command (e.g., marcmoose-lint unimarc.rules marc.iso 2>> workflow_errors.log).

内容的提问来源于stack exchange，提问作者user9691409