能否在gtsummary中多次调用add_n函数?
解决gtsummary连续调用add_n失效的问题
问题原因
连续调用add_n()时,第一次调用会修改表格结构,默认依赖的初始n列(总样本数列)被替换或移除,导致第二次调用add_n()找不到目标列,触发! Column "n" not found and was ignored.警告,且无法生成缺失值计数列。
解决方案
方案1:用add_stat()替代第二次add_n()
add_stat()可直接针对每个变量计算缺失值数量,避免和add_n()的列冲突:
library(gtsummary) library(dplyr) iris %>% tbl_summary(type = list(where(is.logical) ~ "categorical"), missing_text = 'Missing', missing = 'ifany') %>% add_n(statistic = "{N_nonmiss}", col_label = "**N responses**") %>% add_stat( fns = ~n_miss(.), col_label = "**Missing**" )
方案2:通过modify_table_body一次性添加两列
直接修改表格主体数据,手动计算非缺失和缺失值数量,灵活性更高:
library(gtsummary) library(dplyr) iris %>% tbl_summary(type = list(where(is.logical) ~ "categorical"), missing_text = 'Missing', missing = 'ifany') %>% modify_table_body( ~.x %>% mutate( `N responses` = purrr::map_dbl(variable, ~sum(!is.na(iris[[.x]]))), Missing = purrr::map_dbl(variable, ~sum(is.na(iris[[.x]]))) ) ) %>% modify_header(`N responses` = "**N responses**", Missing = "**Missing**")
内容的提问来源于stack exchange,提问作者Julio
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